LOC_Os06g48510

Expression Profile

RGAP LOCUS ID LOC_Os06g48510
RAP-DB ID Os06g0698785
Function choline monooxygenase, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Extracellular
score 2.099

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.95
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCMO
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.088
NLS score -0.47
Protein Sequence >LOC_Os06g48510.1 protein
MAIAQSAAAVSSAARASRPRPTRAAPRRIAASASSVAPPEPAARRLVAAFDPAVPLASAVTPPSGWYTDPDFLRLELDRVFLRGWQAVGHIWQVKNPNDY
FTGRLGNVEFVICRDANGELHAFHNVCRHHASLLACGSGQKTCFQCPYHGWTYGLDGVLLKATQISGIKNFNKNDFGLIPIKVATWGPFVLAKFDSGFSQ
ETADNTVGDEWLGSASDLLSRNGIDTSLPHICRREYIIECNWKVFCDNYLDGGYHVPYAHGTLASGLQLQSYETHTYERVSVQRCESVQAEQNDFDRLGT
KAIYAFVYPNFMINRYGPWMDTNLVVPLDATRCKVIFDYFLDKSLMDDQNFIESSLKDSEQVQMEDIALCEGVQRGLESPAYSVGRYAPSVEMAMHHFHC
LLHANLSGDW

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No