LOC_Os06g46900

Expression Profile

RGAP LOCUS ID LOC_Os06g46900
RAP-DB ID Os06g0682900
Function phosphosulfolactate synthase-related protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Cytoplasmic
score 2.651

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.1
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HSA32
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.132
NLS score 0.12
Protein Sequence >LOC_Os06g46900.1 protein
MAMRRWREDAVALSLRGCGFGDGDDDRPEKPRRYGVTEMRSPFYAFRPAHHALQEILDSLGPFVDGLKFTGGSHSLMGKELVREITDLAHKHDIYVSTGD
WAEHLLRQGPSFFKQYVEECKALGFDTIELNAGSLKLPEEALLRLVRLIKTSGLQAKPLFSVKFDSSDIPPSGDRAFGAYIVPVKQNSERVEDVDLLIRR
AERCLEAGADMIMIDADDICQRADSLRADIVAKIVGRLGLEKTMFEASNPNTSEWFVRRYGPRVNLFVDHSDVMNLERLRGFNMRGVCNSPLFGIGSPFF
LM

GO Analysis
1
GO Category Molecular Function
GO Term hydrolase activity
2
GO Category Biological Process
GO Term response to stress
3
GO Category Biological Process
GO Term response to abiotic stimulus
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Cellular comBiological Processonent
GO Term cell wall
6
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants YES