LOC_Os06g45120

Expression Profile

RGAP LOCUS ID LOC_Os06g45120
RAP-DB ID Os06g0662000
Function ATP synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Cytoplasmic
score 1.738

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.93
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLS1
Function assigned as per literature plays an important role in the regulation of stomatal movement and determination of stomatal density
Subcellular localization as per literature tonoplast
Cells used for localization experiment onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23894405
Reference of localization http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0069046
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.22
Protein Sequence >LOC_Os06g45120.1 protein
MSYDRVTTFEDSEKESEYGYVRKVSGPVVVADGMGGAAMYELVRVGNDNLIGEIIRLEGDSATIQVYEETAGLMVNDPVLRTRKPLSVELGPGILGNIFD
GIQRPLKTIAIKSGDVYIPRGVSVPALDKDQLWDFEPKKLGVGDAITGGDLYATVFENTLMKHHVALPPGSMGKISYIAPAGQYSLQDTVLELEFQGIKK
QFTMLQTWPVRSPRPVSSKLAADTPLLTGQRVLDALFPSVLGGTCAIPGAFGCGKTVISQALSKYSNSEAVVYVGCGERGNEMAEVLMDFPQLTMTLPDG
REESVMKRTTLVANTSNMPVAAREASIYTGITIAEYFRDMGYNVSMMADSTSRWAEALREISGRLAEMPADSGYPAYLAARLASFYERAGKVKCLGSPDR
TGSVTIVGAVSPPGGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSKALESFYEKFDQDFIDIRTKAREVLQREDDLNEIVQLVGKDA
LAESDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFNTLANQAVERAANADGQKITYSVIKHRMGDLFYRLVSQKFEDPAEGEDVLVAK
FQKLYDDLTTGFRNLEDEAR

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Biological Process
GO Term transport
5
GO Category Biological Process
GO Term cellular process
6
GO Category Biological Process
GO Term response to stress
7
GO Category Biological Process
GO Term response to abiotic stimulus
8
GO Category Cellular comBiological Processonent
GO Term plastid
9
GO Category Cellular comBiological Processonent
GO Term plasma membrane
10
GO Category Molecular Function
GO Term hydrolase activity
11
GO Category Molecular Function
GO Term transporter activity
12
GO Category Molecular Function
GO Term protein binding
13
GO Category Cellular comBiological Processonent
GO Term cellular_component
14
GO Category Biological Process
GO Term metabolic process
15
GO Category Biological Process
GO Term cellular component organization
16
GO Category Cellular comBiological Processonent
GO Term vacuole
17
GO Category Cellular comBiological Processonent
GO Term cell wall
18
GO Category Biological Process
GO Term catabolic process
19
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
Presence of Splice variants YES