LOC_Os06g44410

Expression Profile

RGAP LOCUS ID LOC_Os06g44410
RAP-DB ID Os06g0654300
Function histidine kinase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 2.937

3) NUCPRED Prediction
localization Non Nuclear
score 0.69

4) Y-Loc Prediction
localization Nuclear
score 99.29
confidence value 0.95
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category Orphans

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) HK1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.118
NLS score -0.47
Protein Sequence >LOC_Os06g44410.1 protein
MGDEYLAEPEDEVAISMWPENIGDKHQKQFKMEKLGKDQDALEDANFQQKPSSVDLNRLMELANSEKGVSQMQYFVKHWEYKRANTARLLKEQIGLLCQQ
RKEIEQRKQQILEEQQFQDESYYAVKWQVPILDEVYKDEWKRPSKKNDDLSHNQELKIDAEYDSISYWKERAMQLEKTLEASLQRERSLEEKLEENIKNL
QSHTPVEEFSGMLKRADYFLHLVLQSAPIVIAHQDADLRYRFIFNHFPTLADEDVIGKTDYEILSGEGIEEMNNVKKEVMASGKATKREFVFNTPLFGAK
TFVTYIEPVFSKSGETIGVNYVAMDITDQVTRREKMADIRVREAVQKAKETELSKSLHITEETMRAKQMLATMSHEIRSPLSGVLSMAEILATTKLDKEQ
YQLLEVMLSSGDLVLQLINDILDLSKVESGAMKLEATTFRPREVVKHVLQTAAASLKKELILEGCIGDNVPLEVTGDVLRIRQILTNLISNAVKFTHEGK
VGINLHVLDKQLPGCRIEGGQLHSKAHSAPAAAAEHFSASPRKCDNDTLGCSNHEDACQTGIPSNDNFGEHHEGDEVVWLRCDVYDTGIGIPEKSLPLLF
KRYMQASDDHARKYGGTGLGLAICKQLVELMGGTLTVVSKENEGSTFSFVLPCKIPVKEDHSDDPDDMPSSGGDFTTSDIEGSFIFKPQARPYLLTSGVS
VMNNTKLIGGNQFYDPPNILEDRKPFSNGFVLAEDHSTNSASTAHQSNGPSVSRTNKEQHDNAMVIELNRQAERVSSSRGDTTSVSGLIHDERGPCRVHE
EKSLHKKSKCSPSSNKAKILLVEDNKVNIMVAKSMLEQLGHGIDIVNNGLEAIRAIQKRQYDIILMDVHMPEMDGLQATKFIRSFENTGCWDTSVKPEHD
QIIAGSDNLSDCAHMKKQGKRVPIIAMTANSFSESAEECLAAGMDSYISKPVNFQNIKECLQQYLPPQ

GO Analysis
1
GO Category Biological Process
GO Term cellular process
2
GO Category Biological Process
GO Term signal transduction
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Biological Process
GO Term multicellular organismal development
6
GO Category Cellular comBiological Processonent
GO Term cytoplasm
7
GO Category Molecular Function
GO Term kinase activity
8
GO Category Cellular comBiological Processonent
GO Term vacuole
9
GO Category Biological Process
GO Term response to biotic stimulus
10
GO Category Cellular comBiological Processonent
GO Term plasma membrane
11
GO Category Biological Process
GO Term response to stress
Presence of Splice variants No