LOC_Os06g44300

Expression Profile

RGAP LOCUS ID LOC_Os06g44300
RAP-DB ID Os06g0653000
Function WAX2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction

localization plas
score 5

2) CELLO Prediction

localization PlasmaMembrane
score 3.637

3) NUCPRED Prediction

localization Non Nuclear
score 0.16

4) Y-Loc Prediction

localization Chloroplast
score 9
confidence value 0.39
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization

Published gene name (updated 1 January 2020) OsGL1-3
Function assigned as per literature OsGL1-3 is involved in cuticular wax biosynthesis
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment onion skin epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 25555239
Reference of localization http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0116676
Is Subcellular localization evidence by author available ? No

Sequence Analysis

Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.093
NLS score -0.16
Protein Sequence >LOC_Os06g44300.1 protein
MAISMASPLSSWPWAFLGSYKYLLYGPVVGKVVQEWREQGRLPLGTSWCLHLILLLALRSLTYQLWFSYGNMLFFTRRRRVVDDGVDFRQIDTEWDWDNM
VIMQTLIAAVLVTSRVFPATSDLSAWDLRGWAIAVVLHVAVSEPAFYWAHRALHLGPLFSRYHSLHHSFQATQALTAGFVTPLESLILTLVAWAPLAGAF
MAGHGSVSLVYGHILLFDYLRSMGYSNVEVISHKTFQDFPFLRYLIYTPSYLSLHHREKDSNFCLFMPLFDALGGTLNPKSWQLQKEVDLGKNHRVPDFV
FLVHVVDVVSSMHVPFAFRACSSLPFATHLVLLPLWPIAFGFMLLQWFCSKTFTVSFYKLRGFLHQTWSVPRYGFQYFIPSAKKGINEMIELAILRADKM
GVKVLSLAALNKNEALNGGGTLFVRKHPDLRVRVVHGNTLTAAVILNEIPGDVAEVFLTGATSKLGRAIALYLCRKKIRVLMLTLSTERFMNIQREAPAE
FQQYLVQVTKYQAAQNCKTWIVGKWLSPREQRWAPAGTHFHQFVVPPIIGFRRDCTYGKLAAMRLPEDVEGLGTCEYTMGRGVVHACHAGGVVHFLEGWD
HHEVGAIDVDRIDAVWNAALRHGLTPA

GO Analysis

1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Molecular Function
GO Term binding
5
GO Category Biological Process
GO Term reproduction
6
GO Category Biological Process
GO Term cell differentiation
7
GO Category Biological Process
GO Term biosynthetic process
8
GO Category Biological Process
GO Term cellular process
9
GO Category Biological Process
GO Term lipid metabolic process
10
GO Category Molecular Function
GO Term catalytic activity
11
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No