LOC_Os06g44050

Expression Profile

RGAP LOCUS ID LOC_Os06g44050
RAP-DB ID Os06g0649800
Function methyladenine glycosylase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Nuclear
score 2.338

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.08
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Sdt97
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 3
Number of Bipartite 0
Basic residues % 0.15
NLS score 0.47
Protein Sequence >LOC_Os06g44050.1 protein
MAASMAGAPRVRSLNVAETDADARPVLVPGGNKARSGPAAARKPSPKPLRKADTAARTPEKPAAAAAAAAPPAKEEEGAKKNAGGGVGKGSSPLPSPRRA
QPQPPPARKAAHDAPVHLNLSLNASCSSDASVESLRGRDSSGGRLERSWSRVAPAVPRRGKTPVKAAAAAAAAEKVAADAEVVAPATPEAGKRRCAWVTP
TSDPCYVIFHDEEWGVPVHDDRRLFELLVLSGALAELTWPEILKRRQLFREIFVDFDPVAISKINEKKLVAPGSVANSLLSEQKLRAVVENARQILKIVD
EFGSFDRYCWGFLNHKPIVSKFRYPRQVPVKSPKADMISKDMVRRGFRGVGPTIIYSFMQAAGLTNDHLVSCFRFKECNEAPTLCTSDTSNANSEADLSA
DELRTKICSKEMAAKAELLRTIGTLIIS

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term DNA metabolic process
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Molecular Function
GO Term catalytic activity
Presence of Splice variants No