LOC_Os06g43640

Expression Profile

RGAP LOCUS ID LOC_Os06g43640
RAP-DB ID Os06g0643900
Function Ser/Thr protein phosphatase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization vacu
score 10

2) CELLO Prediction
localization Extracellular
score 2.933

3) NUCPRED Prediction
localization Non Nuclear
score 0.32

4) Y-Loc Prediction
localization Secreted pathw
score
confidence value 0.75
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSAP1|OsPAP26
Function assigned as per literature SAP1 plays a role in abiotic stress tolerance in transgenic Arabidopsis plants
Subcellular localization as per literature Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 21534973
Reference of localization https://nph.onlinelibrary.wiley.com/doi/pdf/10.1111/j.1469-8137.2011.03740.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.099
NLS score 0.03
Protein Sequence >LOC_Os06g43640.1 protein
MGWRFALLLLHVLLCLVNGVSCGRTSSYVRTEYPSTDIPLESEWFAVPNGYNAPQQVHITQGDYNGKAVIVSWVTVAEPGTSEVLYGKNEHQYDQRVEGT
VTNYTFYDYKSGYIHHCLVDGLEYNTKYYYKIGSGDSAREFWFETPPAIDPDASYTFGIIGDLGQTFNSLSTLQHYEKSEGQTVLFVGDLSYADRYQHND
GVRWDSWGRLVERSTAYQPWIWSAGNHEIEYRPDLGETSTFKPYLHRCHTPYLASKSSSPMWYAVRRASAHIIVLSSYSPFVKYTPQWTWLKYELKHVDR
EKTPWLIVLMHSPMYNSNEAHYMEGESMRAAFEKWFVKYKVDLVFAGHVHAYERSYRISNINYNITSGNRYPVPDKSAPVYITVGDGGNQEGLASRFSDP
QPDYSAFREASYGHSILQLKNRTHAIYQWNRNDDGKHVPADNVVFHNQYWASNTRRRRLKKKHFHLDQIEDLISVF

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell wall
2
GO Category Cellular comBiological Processonent
GO Term cytosol
3
GO Category Molecular Function
GO Term hydrolase activity
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Biological Process
GO Term biological_process
7
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants YES