LOC_Os06g42030

Expression Profile

RGAP LOCUS ID LOC_Os06g42030
RAP-DB ID Os06g0625800
Function potassium transporter, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 6

2) CELLO Prediction
localization PlasmaMembrane
score 4.892

3) NUCPRED Prediction
localization Non Nuclear
score 0.29

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.12
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHAK10
Function assigned as per literature
Subcellular localization as per literature Tonoplast
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 12376644
Reference of localization http://www.plantphysiol.org/content/130/2/784.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.093
NLS score 1.01
Protein Sequence >LOC_Os06g42030.1 protein
MKSPSPVDPESPSSPDCKGGSSSKRRRLPWRMTMSLAYQSLGVVYGDLSTSPLYVYKAAFAEDIQHSETNEEILGVLSFVFWTLTLVPLLKYVCVVLRAD
DNGEGGTFALYSLLCRHARAALLPPGGGGGGGEPGDEDQFLDAGADKKAAANGNALALSGRGGGGGAAAGVRRLLERHKVLQRVLLVLALVGTCMVIGDG
VLTPAISVFSAVSGLELSMEKHQHKYVEVPIACFVLVCLFCLQHYGTHRVGFLFAPIVITWLLCISMIGVYNIVHWEPNVYRALSPYYMYKFLKKTQRGG
WMSLGGILLCITGSEAMFADLGHFNQLSIQIAFTCMVYPSLILAYMGQAAYLCKHHIIESDYRIGFYVSVPEKIRWPVLAIAILAAVVGSQAVITGTFSM
IKQCTALGCFPRVKIVHTSDKVHGQIYIPEINWILMILCLAITIGFRDTKHLGNASGLAVITVMLVTTCLMSLVIVLCWHKSIFLAFGFIIFFGTIEALY
FSASLIKFREGAWVPIVLAFIFMAIMCIWHYGTIKKYEFDLQNKVSINWLLGLSPNLGIVRVRGIGLIHTELDSGIPAIFSHFVTNLPAFHQVLIFLCIK
NVPIPHVSPEERFLVGRIGPKEYRIYRCIVRYGYHDVHKDDQEFEKELVCSVAEFIRSGAAAAADAAASSKPKNVCGGGAEESEKEEEERMSVIPSGSIR
MMEEDGGAGAPSSEDTVGGSGSGSGRGSSRGGGGAREIMSPSPSPPPVVVAPRKRVRFVLPAASPRPDAGVREELQELMDAREAGMAFILGHSYVKAKSG
SSFFRRLVINFCYDFLRRNSRGPNYAVTIPHASTLEVGMIYYV

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Biological Process
GO Term transport
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term transporter activity
Presence of Splice variants No