LOC_Os06g41090

Expression Profile

RGAP LOCUS ID LOC_Os06g41090
RAP-DB ID Os06g0614000
Function anthranilate phosphoribosyltransferase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.556

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Cytoplasm
score 60
confidence value 0.72
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsFTIP1
Function assigned as per literature OsFTIP1 regulates flowering time in rice under long-days
Subcellular localization as per literature Endoplasmic reticulum
Cells used for localization experiment Nicotiana benthamiana leaf epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 28254780
Reference of localization http://www.plantcell.org/content/29/3/491.long
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.123
NLS score 0.03
Protein Sequence >LOC_Os06g41090.1 protein
MTMTGGHHHDAHHEDFQLKDTNPLLGEQWPKGAAGPARPAVGGGIAGWLGLEKPSSTYDLVEQMFFLYVRVVKAKDLPPNPITGSPMDPYVEVKLGNYKG
TTKHYDRRANPEWDQVFAFSKSRVQSNVLEVYLKDKEMLGRDDYVGRVVFDLAEVPTRVPPDSPLAPQWYRLEERRVGGGGDGGGLKVRGELMLAVWIGT
QADEAFPEAWHSDAATVRGEGVASVRSKAYVSPKLWYLRVNVIEAQDVQPQARGRAPEVFVKAQVGNQILKTSVVAAPTLNPRWNEDLVFVVAEPFEEQL
LLTVEDRVTPRKDDLLGRAALPLALFEKRLDHRPFVQSRWFDLEKFGIGGAIEGETRRELRFASRVHVRACLEGAYHVMDESTMYISDTRPTARQLWKPP
VGVLEVGILGAAGLQPMKNRDGRGTTDAYCVAKYGQKWVRTRTMLGTFSPTWNEQYTWEVFDPCTVITIGVFDNNHLGNGNGNGNNAGGGGGGSPPARDA
RVGKIRIRLSTLETDRVYTHAYPLIVLQPSGVKKMGELRLAVRFTCLSLMNMVHLYTQPLLPRMHYLHPFTVTQLDALRYQAMGIVAARLGRAEPPLRRE
VVEYMLDVESHMWSMRRSKANFFRAVSLFSGAAAAARWFADVCHWKNVATTALVHVLLLILVWYPELILPTVFLYMFMIGLWNYRRRPRHPPHMDTKMSW
AEAVHPDELDEEFDTFPTSRQQDVVYMRYDRLRSVAGRIQTVVGDMATQGERLQSLLGWRDPRATCLFVVFCLVAAVVLYVTPFRVVALVAGLYLLRHPR
FRSRLPAVPSNFFRRLPSRADSML

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No