LOC_Os06g41010

Expression Profile

RGAP LOCUS ID LOC_Os06g41010
RAP-DB ID Os06g0612800
Function zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Nuclear
score 1.323

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Nuclear
score 76.79
confidence value 0.65
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsiSAP8
Function assigned as per literature OsiSAP8 conferstolerance to salt , drought and cold stress in transgenic tobacco and rice
Subcellular localization as per literature Cytoplasm
Cells used for localization experiment N. benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 18205020
Reference of localization https://link.springer.com/content/pdf/10.1007%2Fs11103-007-9284-2.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.129
NLS score -0.47
Protein Sequence >LOC_Os06g41010.1 protein
MEHKETGCQQPEGPILCINNCGFFGSAATMNMCSKCHKEMIMKQEQAKLAASSIDSIVNGGDSGKEPIIAGHAEVAVAQVEVKTLVAQPAEIAGPSEGVT
VNPKGREGPNRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Molecular Function
GO Term binding
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES