LOC_Os06g40640

Expression Profile

RGAP LOCUS ID LOC_Os06g40640
RAP-DB ID Os06g0608700
Function fructose-bisphospate aldolase isozyme, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization extr
score 7

2) CELLO Prediction
localization Cytoplasmic
score 2.646

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Cytoplasm
score 53
confidence value 0.18
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAld-Y
Function assigned as per literature OsAld-Y participates in Chl accumulation, chloroplast development and plant growth by influencing the photosynthetic rate of leaves and the sugar metabolism of rice
Subcellular localization as per literature Peroxisome
Cells used for localization experiment tobacco epidermal cells
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 27457997
Reference of localization https://www.sciencedirect.com/science/article/pii/S0168945216301364?via%3Dihub
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.47
Protein Sequence >LOC_Os06g40640.1 protein
MKLLILLQYVFCKQILICLEFDYYWSHMYCVLCKYGGADELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVEPNRQALRELLFTTPGAFQYLSG
VILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTNGETTTQGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYA
LICQENGLVPIVEPEILTDGAHDIKTCAAVTERVLAAVYKSLNDHKVLLEGTLLKPNMVTPGSDSPKVGAEVIGEYTVAALRRTVPPAVPGIVFLSGGQS
EEEASQNLNAMNKLEVLKPWTLTFSFGRALQQSTIKKWGGKKENVAAAQAAFLARCKANSEATLGKYGGAAGDAATSESLYVKGYTY

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term carbohydrate metabolic process
5
GO Category Biological Process
GO Term generation of precursor metabolites and energy
6
GO Category Biological Process
GO Term catabolic process
7
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES