LOC_Os06g40180

Expression Profile

RGAP LOCUS ID LOC_Os06g40180
RAP-DB ID Os06g0604300
Function phospholipase D, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Cytoplasmic
score 1.901

3) NUCPRED Prediction
localization Non Nuclear
score 0.18

4) Y-Loc Prediction
localization Cytoplasm
score 92
confidence value 0.68
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLDalpha5
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.099
NLS score -0.47
Protein Sequence >LOC_Os06g40180.1 protein
MAHLLMHGTLDATIFEATNLTNPTRLTGNAPEGFRKWWEGLENGLEKTTGLGPGGTRLYATVDLGRARLGRTRVIDDEPVSPRWDERFHFYCAHFAENVV
FSVKVALSVDAKLIGRAYLPVRDLLSGEAVERKLDILGDDKKKLPHGPTIHVRLQFKDVAADGGGKWWGGGVGDAAYPGVPCTYFKQHAGCRVTLYQDAH
APDTFAPRIPLAGGAHYQQGRCWEDVFDAISNAKHLIYITGWSVFTDITLIRDPSRQRPGGDATIGELLKRKASEGVRVLMLVWNDVSSIQALHAIGIKL
SVAQTHDEDTLAYFEDSDVHCVLCPRQADAAAGSSFIMGTKVSLLATHHQKTVIVDHDMPAGTGGGGSDIRCIVSFVGGLDLCDGRYDTQSHSLFRTLDA
AHHKDFHQPSIDDAELAKGGPREPWHDIHSKLEGPIAWDVLYNFEQRWRKQSGHADLLVNLTALEHLITPPSPVKLPGTNNDDHHDDAWNVQLFRSIDGG
ACDGFPSSPEAAARLDLVSGKNNVIERSIQDAYIHAIRRARDFIYIENQYFIGSSYGWRPGGGVRPEDVEAVNLIPRELSLKIVSKIAAGERFAVYVVVP
MWPEGHPGNEAMQAILDWQRRTMEMMYYDIAVALKANHSDADPRDYLTFFCLGNREAKSHGEYVPAHRPDQDTDYAKAQNARRFMIYVHSKMMIVDDEYI
IVGSANINQRSMDGGRDSEIAMGAFQPHHLNVNGQAARGQIHGFRMSLWYEHLGMLHDDFVHPGSLECVRRVNAMADRHWQLYAGEELHGDLPGHLLTYP
VAVEKDGGAVTALPGAEFFPDTEAKVIGTLASSAYMIPYLTS

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term membrane
2
GO Category Molecular Function
GO Term hydrolase activity
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term lipid metabolic process
6
GO Category Cellular comBiological Processonent
GO Term cytosol
7
GO Category Cellular comBiological Processonent
GO Term mitochondrion
8
GO Category Cellular comBiological Processonent
GO Term plasma membrane
9
GO Category Cellular comBiological Processonent
GO Term plastid
10
GO Category Biological Process
GO Term response to endogenous stimulus
11
GO Category Biological Process
GO Term signal transduction
12
GO Category Cellular comBiological Processonent
GO Term nucleus
13
GO Category Cellular comBiological Processonent
GO Term cellular_component
14
GO Category Biological Process
GO Term metabolic process
15
GO Category Cellular comBiological Processonent
GO Term cytoplasm
16
GO Category Biological Process
GO Term post-embryonic development
17
GO Category Molecular Function
GO Term lipid binding
18
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No