LOC_Os06g40170

Expression Profile

RGAP LOCUS ID LOC_Os06g40170
RAP-DB ID Os06g0604200
Function phospholipase D, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 4

2) CELLO Prediction
localization Cytoplasmic
score 2.669

3) NUCPRED Prediction
localization Non Nuclear
score 0.17

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.94
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPLDalpha4
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.101
NLS score -0.47
Protein Sequence >LOC_Os06g40170.1 protein
MAEQQLMHGTLDATIFEATNLTNPTRLTGSAPEGIRKWWEGVEKTTGVGQGGTRLYATVDLGKARLGRTRVIDDEPVNPRWDERFHLYCAHFADNVVFSV
KVSLPIDAALIGRAYLPVGDLLSGEVVERKLDILDEHKNKLPHGPTIHVRLQFKDVAVDGDGKWWGAGVGNAGYAGVPCTYFKQHTGCGVTLYQDAHVPD
TFAPTIPLAGGAHYQQGRCWEDVFDAISNAKHLIYITGWSVFTDITLIRDPSRQRPGGDATIGELLKRKASEGVRVLMLVWNDVTSLQILQSLGIKWGFS
QTHDAETFQYFEDTDVHCVVCARHPDAGGSIVMGVKVPFASTHHQKTVIVDHDMPAGAGSGLRSIVSFVGGLDLCDGRYDTQSHSLFRTLDAAHHKDFHQ
PSIDDAELAKGGPREPWHDIHSRLEGPVAWDVLYNFEQRWRKQSGHGDLLVNLTALEHLIAPQSAMKLPVIGNDDHEAWNVQVFRSIDGGACDGFPSSPD
AAARLDLVSGKNNVIERSIQDAYIHAIRRARDFIYIENQYFIGSSYGWRPDDGVRPEDVEAVNLIPRELSLKIMSKIAAGERFTVYVVVPMWPEGHPDSQ
AMQAILDWQRRTMEMMYADIAGALKAKRMDADPRDYLTFFCLGNREVKRSGEYVPGHHPRDGTPYAKAQKTRRFMIYVHSKMMIVDDEYIIVGSANINQR
SMDGGRDSEIAMGAFQPHHLNIGGQLARGQIHGFRMSLWYEHLGGEPHDDFLHPGSLECVRRVNEMANKHWELYASEELHEDLPGHLLTYPIAVAKDGTV
AALPGAKFFPDTEAPVLGKKAINPLMTPDITS

GO Analysis
1
GO Category Molecular Function
GO Term hydrolase activity
2
GO Category Biological Process
GO Term cellular process
3
GO Category Biological Process
GO Term lipid metabolic process
4
GO Category Biological Process
GO Term metabolic process
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No