LOC_Os06g37660

Expression Profile

RGAP LOCUS ID LOC_Os06g37660
RAP-DB ID Os06g0574500
Function OsPP2Ac-1 - Phosphatase 2A isoform 1 belonging to family 1, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 9

2) CELLO Prediction
localization Cytoplasmic
score 3.971

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.97
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPP2A-1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.088
NLS score -0.47
Protein Sequence >LOC_Os06g37660.1 protein
MPSHADLDRQISQLRECKFLGEAEVRALCEQAKAILMEEWNVQPVRCPVTVCGDIHGQFYDLIELFRIGGDSPDTNYLFMGDYVDRGYYSVETVTLLVAL
KVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALVENQVFCLHGGLSPSLDTLDNIRALDRIQEVPHEGPMCDLLWSDP
DDRCGWGISPRGAGYTFGQDIAQQFNHTNGLTLISRAHQLVMEGFNWCQDKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDTTRK
TPDYFL

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term biological_process
5
GO Category Molecular Function
GO Term hydrolase activity
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
7
GO Category Cellular comBiological Processonent
GO Term cytoplasm
Presence of Splice variants No