LOC_Os06g37560

Expression Profile

RGAP LOCUS ID LOC_Os06g37560
RAP-DB ID Os06g0573600
Function beta-galactosidase precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 10

2) CELLO Prediction
localization Extracellular
score 1.708

3) NUCPRED Prediction
localization Non Nuclear
score 0.02

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.18
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsBGal2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.081
NLS score -0.47
Protein Sequence >LOC_Os06g37560.1 protein
MSGGAVAFLLLVAAAAVANAAVTYDHRSLTINGQRRILISGSIHYPRSTPEMWPDLIQKAKDGGLDVIQTYVFWNGHEPVQGQYYFSDRYDLVRFVKLVK
QAGLYVNLRIGPYVCAEWNYGGFPVWLKYVPGISFRTDNGPFKAAMQTFVEKIVSMMKSEGLFEWQGGPIILAQVENEYGPMESVMGSGAKSYVDWAAKM
AVATNAGVPWIMCKQDDAPDPVINTCNGFYCDDFTPNSKNKPSMWTEAWSGWFTAFGGTVPQRPVEDLAFAVARFIQKGGSFINYYMYHGGTNFDRTAGG
PFIATSYDYDAPIDEYGLLRQPKWGHLTNLHKAIKQAETALVAGDPTVQNIGNYEKAYVFRSSSGDCAAFLSNFHTSAAARVAFNGRRYDLPAWSISVLP
DCRTAVYNTATVTAASSPAKMNPAGGFTWQSYGEATNSLDETAFTKDGLVEQLSMTWDKSDYLWYTTYVNIDSGEQFLKSGQWPQLTVYSAGHSVQVFVN
GQYFGNAYGGYDGPKLTYSGYVKMWQGSNKISILSSAVGLPNVGTHYETWNIGVLGPVTLSGLNEGKRDLSKQKWTYQIGLKGEKLGVHSVSGSSSVEWG
GAAGKQPVTWHRAYFNAPAGGAPVALDLGSMGKGQAWVNGHLIGRYWSYKASGNCGGCSYAGTYSEKKCQANCGDASQRWYHVPRSWLNPSGNLVVLLEE
FGGDLSGVTLMTRTT

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell wall
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term hydrolase activity
5
GO Category Cellular comBiological Processonent
GO Term cellular_component
6
GO Category Biological Process
GO Term carbohydrate metabolic process
Presence of Splice variants No