| RGAP LOCUS ID |
LOC_Os06g33640 |
| RAP-DB ID |
Os06g0527800 |
| Function |
CAPIP1, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
cyto |
| score |
5 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
2.947 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.11 |
4) Y-Loc
Prediction
|
| localization |
Nuclear |
| score |
50.3 |
| confidence value |
0.16 |
| Number Of Software Predicting Nucleus |
2 |
| Seed Specific |
Yes |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRCAR1 |
| Function assigned as per literature |
OsRCAR1 is an ABA rece[tor and interacts with OsGAP1 |
| Subcellular localization as per literature |
OsRCAR1 colocalized with OsGAP1 in Nucleus |
| Cells used for localization experiment |
Rice protoplasts |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
31436865 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/pdf/10.1111/tpj.14501 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.126 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os06g33640.1 protein
MNGAGGAGGAAAGKLPMVSHRRVQCRLADKRCELREEEMEYIRQFHRHEPSSNQCTSFVAKHIKAPLQTVWSLVRRFDQPQLFKPFVRKCVMRENIIVTG
CVREVNVQSGLPATRSTERLELLDDNEHILKVKFIGGDHMLKNYSSILTIHSEVIDGQLGTLVVESFVVDIPDGNTKDDICYFIENVLRCNLMTLADVSE
ERLANP |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
response to endogenous stimulus |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
signal transduction |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Molecular Function |
| GO Term |
receptor activity |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 6 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytoplasm |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
molecular_function |
|
| 8 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| Presence of Splice variants |
YES |
