LOC_Os06g30370

Expression Profile

RGAP LOCUS ID LOC_Os06g30370
RAP-DB ID Os06g0498800
Function osMFT1 MFT-Like1 homologous to Mother of FT and TFL1 gene; contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization PlasmaMembrane
score 1.288

3) NUCPRED Prediction
localization Non Nuclear
score 0.11

4) Y-Loc Prediction
localization Nuclear
score 45.9
confidence value 0.07
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMFT1
Function assigned as per literature OsMFT1 is a suppressor of flowering acting downstream of Ghd7 and upstream of Ehd1, and a positive regulator of panicle architecture.
Subcellular localization as per literature OsMFT1 is co-localized with GHD7 in Nucleus
Cells used for localization experiment Rice protoplasts cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 30124949
Reference of localization https://academic.oup.com/jxb/article/69/18/4283/5042223
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.108
NLS score 0.27
Protein Sequence >LOC_Os06g30370.1 protein
MASHVDPLVVGRVIGDVVDLFVPTTAMSVRFGTKDLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSPSEPTMREWLHWLVVNIPGGTDPSQG
DVVVPYMGPRPPVGIHRYVMVLFQQKARVAAPPPDEDAARARFSTRAFADRHDLGLPVAALYFNAQKEPANRRRRY

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term nucleus
2
GO Category Molecular Function
GO Term lipid binding
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term post-embryonic development
Presence of Splice variants No