LOC_Os06g30320

Expression Profile

RGAP LOCUS ID LOC_Os06g30320
RAP-DB ID Os06g0498500
Function NOC3 - Putative nucleolar complex subunit 3, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 6

2) CELLO Prediction
localization Nuclear
score 4.206

3) NUCPRED Prediction
localization Nuclear
score 0.91

4) Y-Loc Prediction
localization Nuclear
score 99.96
confidence value 0.96
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) NOC3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 3
Number of Bipartite 1
Basic residues % 0.168
NLS score 2.64
Protein Sequence >LOC_Os06g30320.1 protein
MGKSSSKKKKDKVILPPQLPPEVDDDDVVVSDEDVEFFRGNEGHARALATLDRKSIDSYVTRVAHHDEDEVERLYEERERRRKAVEALRPKNHDDDDFEV
DRVDALPVKTLQGELVYNNAKKARFDDSSNNVESKSEDKVGNSKQTIQKGERKEKSKSKKGDGKLQNVQAQTEASNGKLQSKVLEEVKEELSAEELFEKK
KAQLAEIGMSMLEDPESHIRSLNDMLNICNDKDQKVVKLSLMSLLAVFRDIIPSYRIRQLTEKELTVEVSKDVKKMRYYEYTLLRSYKAYLQKLISLEKQ
PNFSALAVRCMCTLLDTAPHFNFRESILASVARNLSSPDDAVRKMCCETIRSLFVDEGKHRGEATVEAVRLIADHVKLNDCQLHPDSIEVFLSLRFDDDL
GKDDTEEEKGKPKKNKRRQNQEVPKQLPVSDNKKAKQELISKAREEVDAELRSVSFTLDPKERRRIQKEALSALFETYFRILKHSMSISNSRGKVINVSP
DGSHPLLAPCLEGLGKFSHLIDLDFMGELVACLKKLSGYTDHHSGTVHDNTLSVSERLQCCIVAFKVWRSNLEALNVDLQDFFVQLFNLILEYRPDRDRG
EVLADALKTLLWEGKQQDMIRAAAFIKRLATFALSFGSAEAMAALITLKHLLQKNSKCRNMLENDSGGGSLSCLVAKYDPEAKDPYLSGALASVLWELSL
LQKHYDSSVSSMASNILSMANLNPTQNPVPISNASPLEAYRDLSMERKLSKPANKLLPLNCRKKRRGKEFVALSPAALEGSDCVAGGDELKEKLKNHFAV
LRGISENERLRAELNHTLSSINLYKEYKKQKKSRKSKAVKKKVSRA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants No