LOC_Os06g29810

Expression Profile

RGAP LOCUS ID LOC_Os06g29810
RAP-DB ID Os06g0494100
Function lectin protein kinase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 8

2) CELLO Prediction
localization Extracellular
score 1.94

3) NUCPRED Prediction
localization Non Nuclear
score 0.4

4) Y-Loc Prediction
localization Chloroplast
score 7
confidence value 0.13
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPK10|Pid2
Function assigned as per literature Pi-d2 confers rice blast resistance
Subcellular localization as per literature Plasma membrane
Cells used for localization experiment Arabidopsis roots
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 16709195
Reference of localization https://onlinelibrary.wiley.com/doi/epdf/10.1111/j.1365-313X.2006.02739.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.08
NLS score 0.03
Protein Sequence >LOC_Os06g29810.2 protein
MQMCGWLLKVVRWENLNCVHMEAHGNRRSSPTYLVMLWMISVASLLITCRGSIQKQVLFPGFTAAQMDYIDNDGIFLLSNGSVFGFGFVTSNVSDNTFYI
LAVVHMATTTTVWSANPNSPVTHSDDFFFDKDGNAFLQSGGGSNVWAANISGKGTATSMQLLDSGNLVVLGKDASSPLWQSFSHPTDTLLSGQNFIEGMT
LMSKSNTVQNMTYTLQIKSGNMMLYAGFETPQPYWSAQQDSRIIVNKNGDSIYSANLSSASWSFYDQSGSLLSQLVIAQENANATLSAVLGSDGLIAFYM
LQGGNGKSKFSITVPADSCDMPAYCSPYTICSSGTGCQCPLALGSFANCNPGVTSACKSNEEFPLVQLDSGVGYVGTNFFPPAAKTNLTGCKSACTGNCS
CVAVFFDQSSGNCFLFNQIGSLQHKGGNTTRFASFIKVSSRGKGGSDSGSGKHNTIIIVIMLGTLAIIGVLIYIGFWIYKRKRHPPPSQDDAGSSEDDGF
LQTISGAPVRFTYRELQDATSNFCNKLGQGGFGSVYLGTLPDGSRIAVKKLEGIGQGKKEFRSEVTIIGSIHHIHLVKLRGFCTEGPHRLLAYEYMANGS
LDKWIFHSKEDDHLLDWDTRFNIALGTAKGLAYLHQDCDSKIVHCDIKPENVLLDDNFIAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWLTNYAIS
EKSDVYSYGMVLLEIIGGRKSYDPSEISEKAHFPSFAFKKLEEGDLQDIFDAKLKYNDKDGRVETAIKVALWCIQDDFYQRPSMSKVVQMLEGVCEVLQP
PVSSQIGYRLYANAFKSSSEEGTSSGMSDYNSDALLSAVRLSGPR

GO Analysis
1
GO Category Molecular Function
GO Term carbohydrate binding
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Molecular Function
GO Term protein binding
6
GO Category Cellular comBiological Processonent
GO Term plasma membrane
7
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants YES