LOC_Os06g27760

Expression Profile

RGAP LOCUS ID LOC_Os06g27760
RAP-DB ID Os06g0472000
Function peptide methionine sulfoxide reductase msrB, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Extracellular
score 2.311

3) NUCPRED Prediction
localization Non Nuclear
score 0.57

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMSRB1.1
Function assigned as per literature OsMSRB1.1 is a methionine sulfoxide reductases, that is involved in abiotic stress response
Subcellular localization as per literature Chloroplast
Cells used for localization experiment transgenic Arabidopsis. 
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 19415325
Reference of localization https://link.springer.com/article/10.1007%2Fs00425-009-0934-2
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.131
NLS score -0.47
Protein Sequence >LOC_Os06g27760.1 protein
MAMRQYAAATAASSSFRARPRARPSCLPAAALPLAPCCGVAWSRASYRRASVRAMGAASSSSSSSSSSPSPQGQAQAQAQGKPNYSTSLTDEEWRKRLTK
DQYYITRQKGTERAFTGEYWNTKTPGIYHCVCCDTPLFESSTKFDSGTGWPSYYQPIGDNVKCKLDMSIIFMPRTEVLCAVCDAHLGHVFDDGPRPTGKR
YCINSASLKLKKTQ

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Molecular Function
GO Term catalytic activity
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants YES