LOC_Os06g26340

Expression Profile

RGAP LOCUS ID LOC_Os06g26340
RAP-DB ID Os06g0367900
Function CGMC_MAPKCMGC_2.10 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 5

2) CELLO Prediction
localization Nuclear
score 1.514

3) NUCPRED Prediction
localization Non Nuclear
score 0.48

4) Y-Loc Prediction
localization Cytoplasm
score 60
confidence value 0.22
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsMPK11|OsMAPK11
Function assigned as per literature OsMAPK11 interacts with OsPAL2;3 to modulate rice allelopathy
Subcellular localization as per literature OsMAPK11 interacts with OsPAL2;3 in the cytoplasm
Cells used for localization experiment Nicotiana benthamiana leaves
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 31811717
Reference of localization https://academic.oup.com/jxb/advance-article-abstract/doi/10.1093/jxb/erz540/5667447?redirectedFrom=fulltext
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.119
NLS score -0.47
Protein Sequence >LOC_Os06g26340.1 protein
MQTSNFRKKNAAEVDFFMGYGDVNRYEVLEVIGKGSYGLVCSANDIHTGEKVAIKKIHNIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSKMDF
RDIYVVFELMESDLHQVIKANDDLTREHYQFFLYQMLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFTDAPTTVFWTDYVATRWYRAPE
LCGSFYSKYTPAIDIWSIGCIFAEVLIGKPLFPGKNVVHQLDLITDLLGTPSLDAISQVRNDKARKYLTCMRKKQPASFSHKFLKADPLALQLLRKLLAF
DPKDRPSAQEALADPYFNGLAKVEREPSCQPIPKMEFEFERRRATKEDIKELIFQEILEYHPQLLKEHISGTERPNFHHLSVVDQFRKQFTQVEENLNGS
GAAVSLQRKHSSLPRSTIVHSAAIPAKDYKHVASSSTKLAVDGSWNAQIQGVHANIAGEPSTIVRPAVSSERSLAPTLQWQPNMTHFLNHALCYQNTVFS
GSLLDATGPAQAIPRTTPYVDYRSGNLDLYQHHVSREDVQSDTATAQAHAASHGPVPAVSYSLPGTYRIT

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Biological Process
GO Term protein modification process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Molecular Function
GO Term signal transducer activity
Presence of Splice variants YES