LOC_Os06g22460

Expression Profile

RGAP LOCUS ID LOC_Os06g22460
RAP-DB ID Os06g0330100
Function disease resistance protein RPM1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Nuclear
score 1.253

3) NUCPRED Prediction
localization Non Nuclear
score 0.49

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.88
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Pi25|Pid3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.134
NLS score -0.47
Protein Sequence >LOC_Os06g22460.1 protein
MAEGVVGSLIVKLGDALASEAVEVAKSLLGLEGSALKRLFSEIREVKGELESIHAFLQAAERFKDADETTSAFVKQVRSLALSIEDVVDEFTYELGEGDG
RMGMAVALKRMCKMGTWSRLAGNLQDIKVNLKNAAERRIRYDLKGVERGAKSMAGRRSSNWRSDSVLFKREDELVGIEKKRDLLMKWVKDEEQRRMVVSV
WGMSGIGKTALVANVYNAIKADFDTCAWITVSQSYEADDLLRRTAQEFRKNDRKKDFPIDVDITNYRGLVETTRSYLENKRYVLVLDDVWNANVWFDSKD
AFEDGNIGRIILTSRNYDVALLAHETHIINLQPLEKHHAWDLFCKEAFWKNEIRNCPPELQPWANNFVDKCNGLPIAIVCIGRLLSFQGSTYSDWEKVYK
NLEMQLTNNSIMDMMNIILKISLEDLPHNIKNCFLYCSMFPENYVMKRKSLVRLWVAEGFIEETEHRTLEEVAEHYLTELVNRCLLLLVKRNEAGHVHEV
QMHDILRVLALSKAHEQNFCIVVNHSRSTHLIGEARRLSIQRGDFAQLADHAPHLRSLLLFQSSPNVSSLQSLPKSMKLLSVLDLTDSSVDRLPKEVFGL
FNLRFLGLRRTKISKLPSSIGRLKILLVLDAWKCKIVKLPLAITKLQKLTHLIVTSKAVVVSKQFVPSFDVPAPLRICSMTTLQTLLLMEASSQMVHHLG
SLVELRTFRISKKLFLQGTLSHESLPHFVSVSNLNNLTFLRLAGSRIDENAFLNLEGLQQLVKLQLYDAYDGMNIYFHENSFPKLRILKIWGAPHLNEIK
MTKGAVASLTDLKFLLCPNLKQLPCGIEHVRTLEELTLDHTAEELVDRIRQKKERMICDVQRVYVGFIRNGVLAAERIQ

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term cell death
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Molecular Function
GO Term nucleotide binding
5
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No