LOC_Os06g21390

Expression Profile

RGAP LOCUS ID LOC_Os06g21390
RAP-DB ID Os06g0318700
Function Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 10

2) CELLO Prediction
localization Nuclear
score 3.756

3) NUCPRED Prediction
localization Non Nuclear
score 0.61

4) Y-Loc Prediction
localization Mitochondrion
score
confidence value 0.41
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category C3H

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) MKRN
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.122
NLS score -0.47
Protein Sequence >LOC_Os06g21390.1 protein
MSTKRVLCKFFMHGACLKGEYCEFSHDWNDQPNNVCTFYQKGSCSYGSRCRYDHVKVSRNPTVAPPPSSSTTTRASSSLQPLSFGRPHHVGYQADSSNPR
QQISMDVLAHSGSKPVWRNDFQHESVLEDGIDWSISPTVQNQTTLSPADLPICSFAAGGNCPYGEECPQMHGDLCTTCGKMCLHPYRPDEREEHTKLCEK
NHKRLESLKRSQEIECSVCLDRVLSKPTAAERKFGLLSECDHPFCISCIRNWRNNSPTSGMDVNSALRACPICRKLSYYVIPSVLWYFSKEEKLEIIDNY
KAKLKSIDCKYFDFGTGTCPFGSSCFYKHAYRDGRLEEVILRHLDADDGSTVIAKNIRLSDFLSRLHL

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Molecular Function
GO Term nucleic acid binding
Presence of Splice variants YES