LOC_Os06g20320

Expression Profile

RGAP LOCUS ID LOC_Os06g20320
RAP-DB ID Os06g0308000
Function peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13.5

2) CELLO Prediction
localization Cytoplasmic
score 1.599

3) NUCPRED Prediction
localization Non Nuclear
score 0.64

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.29
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsTIG
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.125
NLS score -0.1
Protein Sequence >LOC_Os06g20320.1 protein
MELATATAAAAASSTTRAHRPRSSRLAVPTRDSCSLLPSSSSRQFAALSTSAASTASRSRAQRRRLPVASAAVELREASSQGGDSVRVTETLQPGSSVKF
SVEVPPSICQQCYETTLQEYAKRFKIPGFRPGKVVPENVLINYVGPKHVQDATVEAILRHTLPQALSSVEDRALEDSVRILTKFEDMANSFSLDNVFRYD
VSVDVAPEVRWLSEDKYKNLKVVVEIDEIVDAEKAAEIELKRRHKALGLLRIVADRGLQVGDLVVLDIFAESITSDGSKGEKIPSAESKGFHLDTEENNN
LVPGFLGSLIGIRPGETRSFPLQFPESFEQESLQGVRAQFTVVCKELFYRELPELDDSLAGKLLPGCTTMDQVRERILQRCKEVEKTAIEQATDNAILDQ
LGKLVEVDVPRALFQEQGQQLYGAKLLQLQAERKLDKDQLASLSSQKSVQEYLESERENINRIIKQMLAVGEIFKAENLQFSTEQLVKEVENSIEEFKHY
NQDYDEGSIKQQVQDVLEAAKVLEWLKENCIIEYIRP

GO Analysis
1
GO Category Biological Process
GO Term protein metabolic process
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term catalytic activity
4
GO Category Biological Process
GO Term protein modification process
5
GO Category Cellular comBiological Processonent
GO Term plastid
6
GO Category Biological Process
GO Term transport
Presence of Splice variants No