| RGAP LOCUS ID |
LOC_Os06g16270 |
| RAP-DB ID |
Os06g0274000 |
| Function |
heat shock factor binding protein 2, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
7 |
2) CELLO
Prediction
|
| localization |
Extracellular |
| score |
2.099 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.07 |
4) Y-Loc
Prediction
|
| localization |
Secreted pathw |
| score |
|
| confidence value |
0.41 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsHSBP2 |
| Function assigned as per literature |
OsHSBP2 plays roles in the regulation of the heat shock response and seed development of rice |
| Subcellular localization as per literature |
Cytosol and nucleus |
| Cells used for localization experiment |
Onion epidermal cells |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
22996677 |
| Reference of localization |
https://academic.oup.com/jxb/article/63/16/6003/730230 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.056 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os06g16270.1 protein MQADQDSDGSAQSTADMTAFVQNLLMQMVSNFVHMAGRCEFHAITSLLLNCNFLAANQVPIYVREHHFKDR |
GO Analysis |
| 1 |
| GO Category |
Biological Process |
| GO Term |
reproduction |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
post-embryonic development |
|
| 3 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
nucleus |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
response to stress |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
response to abiotic stimulus |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 8 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| Presence of Splice variants |
No |
