| RGAP LOCUS ID |
LOC_Os06g13810 |
| RAP-DB ID |
Os06g0247500 |
| Function |
pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
7 |
2) CELLO
Prediction
|
| localization |
Cytoplasmic |
| score |
2.222 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.08 |
4) Y-Loc
Prediction
|
| localization |
Chloroplast |
| score |
9 |
| confidence value |
0.47 |
| Number Of Software Predicting Nucleus |
0 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
PFP1 |
| Function assigned as per literature |
PFP1 modulates endosperm metabolism, potentially through reversible adjustments to metabolic fluxes |
| Subcellular localization as per literature |
Cytoplasm |
| Cells used for localization experiment |
Nicotiana benthamiana leaves |
| NUCLEAR or Not Nuclear |
NOT NUCLEAR |
| PMID |
31131526 |
| Reference of localization |
https://onlinelibrary.wiley.com/doi/epdf/10.1111/pbi.13173 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
0 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.102 |
| NLS score |
-0.47 |
| Protein Sequence |
>LOC_Os06g13810.1 protein
MAAAAVAANGGGDGAQASNAPAPTRLASVYSEVQTSRLKHALPLPSVLRSPFALADGPASSAAGNPGEIAKLFPNLFGQPSVSLVPSPEPASTRPLKVGV
VLSGGQAPGGHNVICGIFDYLQEYAKGSVMYGFKGGPAGVMKCKYVELTADYVYPYRNQGGFDMICSGRDKIETPEQFKQAEDTVNKLDLDGLVVIGGDD
SNTNACLLAEYFRGKNMKTRVIGCPKTIDGDLKCKEVPTSFGFDTACKIYSEMIGNVMTDARSTGKYYHFVRLMGRAASHITLECALQTHPNVALIGEEV
AAKKETLKSVTDYITDIVCKRAELGYNYGVILIPEGLIDFIPEVQKLIAELNEILAHDVVDEAGAWKSKLQPESRQLFDFLPKTIQEQLLLERDPHGNVQ
VAKIETEKMLIAMVETELEKRKAEGKYPAHFRGQSHFFGYEGRCGLPTIFDSNYCYALGYGSGALLQCGKTGLITSVGNLAAPVEEWTVGGTALTSLMDV
ERRHGKYKPVIKKAMVELDGAPFKKFASLRDEWSLKNHYISPGPIQFSGPGSNDANHTLMLELGAEA |
GO Analysis |
| 1 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
membrane |
|
| 2 |
| GO Category |
Biological Process |
| GO Term |
carbohydrate metabolic process |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
generation of precursor metabolites and energy |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
catabolic process |
|
| 5 |
| GO Category |
Molecular Function |
| GO Term |
kinase activity |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 7 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 8 |
| GO Category |
Biological Process |
| GO Term |
biological_process |
|
| 9 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cell wall |
|
| 10 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cytosol |
|
| 11 |
| GO Category |
Biological Process |
| GO Term |
photosynthesis |
|
| Presence of Splice variants |
YES |
