LOC_Os06g12090

Expression Profile

RGAP LOCUS ID LOC_Os06g12090
RAP-DB ID Os06g0225000
Function miro, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7.5

2) CELLO Prediction
localization PlasmaMembrane
score 1.264

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Cytoplasm
score 99
confidence value 0.97
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSar1d
Function assigned as per literature OsSAR1 is crucial for proglutelin and α-globulin export from the endoplasmic reticulum in rice endosperm
Subcellular localization as per literature ERES, at the ER, and in the cytosol
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 23682119
Reference of localization https://academic.oup.com/jxb/article/64/10/2831/541842
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.103
NLS score -0.47
Protein Sequence >LOC_Os06g12090.1 protein
MSFLLDWFYDVLASIGLWQKEAKILFLGLDNAGKTTLFYMLSQENLAVHQPTQHPTSEELSIGRIRFKAFDLGGHRIARRVWRDYYAQVDAVVYVVDAAD
RCRFAESKMELDALLSDDALAGVPFLVLGNKIDIPYAVPEQELCYYLGLTGLTTGKGNVNLAGTGVRPVEVFMCSVVRRMGYGDGFRWMSQYIK

GO Analysis
1
GO Category Biological Process
GO Term transport
2
GO Category Biological Process
GO Term cellular process
3
GO Category Molecular Function
GO Term nucleotide binding
Presence of Splice variants No