LOC_Os06g11990

Expression Profile

RGAP LOCUS ID LOC_Os06g11990
RAP-DB ID Os06g0223800
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization PlasmaMembrane
score 1.528

3) NUCPRED Prediction
localization Non Nuclear
score 0.31

4) Y-Loc Prediction
localization Cytoplasm
score 86
confidence value 0.33
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCSIL1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.084
NLS score -0.47
Protein Sequence >LOC_Os06g11990.1 protein
MIPLWLLAVFARHDSKTRAEILEAGAVEMLMEKISQNAFLYVGEEDSTAWVCALLLALLFQEREINRSNAALHSIPVLSNLLRSDEQAYRYFAAQALASL
VCNGSRGTLLAVANSGAATGLISLLGCAEVDIADLLELSEEFMLVPNPDQITLERLFRVDDIRVGATSRKSIPLLVDLLKPIPERPGAPFLALGLLTQLA
IDCPPNMMLMAEAGILEALTKYLSLSPQDATEEATTDLLGILFSCAEIRHNEAALGTVNQLVAVLRLGGRNSRYSAAKALESLFIADHVRNSESARQAIQ
PLVEILSTGMEREQHAATSALVRLLSDNPSRALTVADVEMNAVDVLCRILSSDSSAELKGDAAELCCVLFANTRIRSTSAAARCVEPLVALLVCEANPAQ
LSVVRALDRLLDDEQLAELVAAHGAVIPLVGLLFGKNYTLHEAVARALVKLGKDRPGCKLEMVKAGVIESILDILHDAPDFLCIALAEMLRILTNNASIA
KGPSAAKVVQPLFSLLSKADIGPEGQYSTLQVLVNILEHPECRADYNLTPRQTIEPVISLLNSSPPAVQQLAAELLSHLILEENLQKDTITELAIPPLIQ
VLSSGLPNLQQRAIKALANLALAWPNTIAKEGGVFELSKVLLQSDPPLPHVVWESAASVLSSILQYSTEFFLEVPVAVLVQLLRSGTESTVVGALNALLV
LESDDSTSAEAMAESGAVEALLDLLRSHQCEEAAARLIEALLNNVRIREAKAAKNAIAPLSMYLLDPQTQSQQGRLLAALALGDLFQNEGLARSTDAVAA
CRALVNLLEDQPTEEMKVVAICALQNLVMYSRANKRAVAESGGVQVLLDLISSSNPDTSVQAAMFVKLLFNNHTIQEYATSETVRVITASIEKDIWASGS
ANEEYLKALNALLSNFPRLRVTEPATLCIPHLVTSLKTGSEATQEAALDSLYLLRQAWGACAAEIFKAQSVAASEAIPLLQYLIQSGPPRFQEKAELLLQ
CLPGTLTVTIKRGNNLRQSVGNPSAFCKLTLGNNPPRLTKIVSTGATPEWDEAFAWAFDSPPKGQKLHISCKNNSKFGKKSFGKVTIQIDRVVMLGSVAG
EYTLLPESKSGPNRNLEIEFQWSNK

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cellular_component
2
GO Category Biological Process
GO Term biological_process
3
GO Category Molecular Function
GO Term binding
4
GO Category Cellular comBiological Processonent
GO Term plasma membrane
Presence of Splice variants No