LOC_Os06g08770

Expression Profile

RGAP LOCUS ID LOC_Os06g08770
RAP-DB ID Os06g0186900
Function ruvB-like 2, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Cytoplasmic
score 1.392

3) NUCPRED Prediction
localization Non Nuclear
score 0.35

4) Y-Loc Prediction
localization Nuclear
score 78.99
confidence value 0.15
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OIP30
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.128
NLS score -0.47
Protein Sequence >LOC_Os06g08770.1 protein
MAELKRLSESRDLTRIERIGAHSHIRGLGLDSSLEARGSSEGMVGQLPARRAAGLILQLIRQGKIAGRAVLLAGQPGTGKTALAMGIAKSLGAETPFASV
AASELFSLDLSKTEALTQAFRRSIGVRIKEEAEIIEGEVVEISIDRPVSAAAAAGSSAPSGVAAAGKTGRLTLKTTDMETVYELGGKMIEALGKEKVQSG
DVVALDKASGKVTKLGRSIGRSRDYDAVGPHTKFVKCPEGELQKRKEVVHCVTLHEIDVINSRTQGFLALFTGDTGEIRAEVREQIDTKVAEWREEGKAE
IVPGVLFIDEVHMLDIECFSFLNRALENDMAPILVIATNRGITSIRGTNYRSPHGIPPDFLDRLLIITTQPYTEDDIRKILDIRCDEEDVEMSADAKVLL
TKIGVETSLRYAIHLITSAALACQKRKGKVVEMEDISRVYQLFLDVKRSTQYLMEYQSQYMFNEVPGEAGDDAMQS

GO Analysis
1
GO Category Biological Process
GO Term metabolic process
2
GO Category Molecular Function
GO Term nucleotide binding
3
GO Category Cellular comBiological Processonent
GO Term nucleolus
4
GO Category Molecular Function
GO Term hydrolase activity
5
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No