LOC_Os06g08580

Expression Profile

RGAP LOCUS ID LOC_Os06g08580
RAP-DB ID Os06g0184900
Function transferase family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 7

2) CELLO Prediction
localization Chloroplast
score 1.519

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Cytoplasm
score 88
confidence value 0.52
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPHT1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.108
NLS score -0.47
Protein Sequence >LOC_Os06g08580.1 protein
MAVEIVKSSMVTAGEATPEHRIWLSNLDLLVARSHTPTVYVYRRTGPDSDAAFFSPDVLKAALSKVLVPFYPLAGRLAQDSAGRPEISCTGEGVLFVTAR
SGATIDDLGDLAPSDELRRMLVPAADVAAASILAMFQVTFFRCGGVCLGAAIHHTAADGLAALDFVNTWAAIARDVAGDGEAAAAAVQRPWLDRTLLRAR
SPPAVRFDHAEYSRRRGGGSKLPFDSAILPMSKNQLNALKGAGAGAGKRLSTFTAVVAHVWRCACKARGLAVAGTEAATRLYMTADARTRLHPPLPRGYL
GNAIFRASAVSKVSDIVAAGPLGAVAEKVSAATARLDDGYVRSLLDHLEQTAAAASGGAAGLRKGEWVMPESDLWVISWQGLPLYDADFGWGRPAFMGRA
CLQFSGLVYLVPGRDDGDGRLDVVVAMDPESLAKFKDVFYEELKC

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term secondary metabolic process
6
GO Category Cellular comBiological Processonent
GO Term cytosol
7
GO Category Biological Process
GO Term biological_process
Presence of Splice variants No