LOC_Os06g08290

Expression Profile

RGAP LOCUS ID LOC_Os06g08290
RAP-DB ID Os06g0181300
Function MYB family transcription factor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 6

2) CELLO Prediction
localization Nuclear
score 1.274

3) NUCPRED Prediction
localization Non Nuclear
score 0.63

4) Y-Loc Prediction
localization Nuclear
score 99.77
confidence value 0.64
Number Of Software Predicting Nucleus 2
Seed Specific No
Transcription factor category MYB_related

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) AID1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 1
Basic residues % 0.12
NLS score 0.59
Protein Sequence >LOC_Os06g08290.1 protein
MPRLMPEDASLLLDHVVGDPSVPAAAANAALAALPFPSRPTPRLLRASLLRRLAADPVSAAALDSLQLLASLPSSPSPAAPAAAAAAAAHLAVAAYLAVS
APDFDAAAGALFGRPGGRARRAVEEGGAAALASDEADAVADQFEAAVGNSFSQTVLRGLWGDRAAAEERVRELLAVEWAAIGQSRLEMAAERIVGDGAIE
TWRAADEVTRAKYRLLAGEQRAREIEGKLGETIPQGNQISTPEVHKVMDALKSSCANLHSVVEDPLPAAKAAADEVLAARMDKAVDLNAGEVSNQPTACD
IAGPSAPADNLDAPRKGTAASLMDWNPTARTFQWEDSPDPDGSRSPIHRPQLPSPRRTTFSPLQPADNKAKRRKARKWCALEEETLRKGVEQYGNGNWKD
ILTNNPDVFIGRKAMDLKDKWRNMMR

GO Analysis
1
GO Category Molecular Function
GO Term DNA binding
2
GO Category Biological Process
GO Term biosynthetic process
3
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
4
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants No