LOC_Os06g06040

Expression Profile

RGAP LOCUS ID LOC_Os06g06040
RAP-DB ID Os06g0153900
Function expressed protein

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 14

2) CELLO Prediction
localization Chloroplast
score 2.656

3) NUCPRED Prediction
localization Non Nuclear
score 0.03

4) Y-Loc Prediction
localization Chloroplast
score 5
confidence value 0.29
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsHOL2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.112
NLS score -0.22
Protein Sequence >LOC_Os06g06040.1 protein
MHALPRSRLGFGFFASMSSSAARVGGGGGRDPSNNPAVGRLRELVQRGDAADGWEKSWEAAVTPWDLGKPTPIIEHLVKSGTLPKGRALVPGCGTGYDVV
ALASPERFVVGLDISSTAVEKAKQWSSSLPNADCFTFLADDFFKWKPSEQFDLIFDYTFFCALDPSLRLAWAETVSGLLKPHGELITLIYLISDQEGGPP
FNNTVTDYQKVLEPLGFKAILMEDNELAIKPRKGQEKLGRWKRFVPGSSL

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Cellular comBiological Processonent
GO Term plastid
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES