LOC_Os06g04920

Expression Profile

RGAP LOCUS ID LOC_Os06g04920
RAP-DB ID Os06g0141200
Function zinc finger family protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization mito
score 5

2) CELLO Prediction
localization Extracellular
score 3.011

3) NUCPRED Prediction
localization Non Nuclear
score 0.1

4) Y-Loc Prediction
localization Nuclear
score 32.8
confidence value 0.02
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsZFP1|SRZ3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.131
NLS score -0.47
Protein Sequence >LOC_Os06g04920.1 protein
MNIQRKPGDWNCKSCQHLNFSRRDYCQRCHTPRQDLPLGDGYVPGGVLTSLDIRPGDWYCNCGYHNFASRASCFKCGAIVKDLPAGQGGGVANGDFARAL
DSSAVRAGWKAGDWICTRPGCNVHNFASRIECYRCNAPREAGNVK

GO Analysis
1
GO Category Molecular Function
GO Term binding
2
GO Category Cellular comBiological Processonent
GO Term intracellular
3
GO Category Biological Process
GO Term biological_process
Presence of Splice variants YES