LOC_Os06g04070

Expression Profile

RGAP LOCUS ID LOC_Os06g04070
RAP-DB ID Os06g0131300
Function pyridoxal-dependent decarboxylase protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 7

2) CELLO Prediction
localization Chloroplast
score 1.656

3) NUCPRED Prediction
localization Non Nuclear
score 0.05

4) Y-Loc Prediction
localization Cytoplasm
score 84
confidence value 0.44
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsADC1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.08
NLS score -0.47
Protein Sequence >LOC_Os06g04070.1 protein
MPALAVDAAAPVAHAFACDAARFPAPLLGPAAAAAAVAEKPDAAAWSADLSSALYNVDGWGAPYFFVNDDGDVAVRPHGAATLPGQEIDLAKVVAKAAGP
RSGGGLGLPLPLLVRFPDVLRHRVEALNAAFDYAVRSTGYGGRYQGVYPVKCNQDRHVVEDIVEFGEPFRFGLEAGSKPELLLAMSCLAARGNPDALLIC
NGYKDDEYVSLALIARTMGLNTVIVLEQEEELDIVVDASRRLGVRPVVGMRAKLRTKHAGHFGSTSGEKGKFGLNAAQILSVVAKLKTLGMLDCLQLLHF
HIGSQIPTTALLGDGVGEAAQIYCELARLGAAMRVIDVGGGLGIDYDGSHSAQTDMSVAYSLEEYAAAVVAAVGRVCDRKGVAHPIICSESGRALVSHHS
VLVFEAFSASAPGRIDPATGYLLDELTDDCHADYRNLMAAAVRGDFDTCALYADQLKRRCADQFKDGVLGLEHLAAVDSLCEIVARGMGAAEPPRTYHIN
LSVFTSLPDMWAIGQMFPIIPIQRLGERPAVDGVLSDLTCDSDGKVDHFIGGRHSLPLHELPVHGTRGYYLGMFLGGAYQEALGGLHNLFGGPSVVRVSQ
SDGPHCFAVTRAAAGPSCADVLRSMQHEPEVMFEVLKQRTDGATAAALARAFGAMPYLSFDPEAAAMASGESSGMSSDSEGSAAGAAEEDDDEWEFMRGL
TV

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term response to endogenous stimulus
4
GO Category Biological Process
GO Term biosynthetic process
5
GO Category Biological Process
GO Term cellular process
6
GO Category Molecular Function
GO Term catalytic activity
7
GO Category Biological Process
GO Term reproduction
8
GO Category Biological Process
GO Term post-embryonic development
9
GO Category Biological Process
GO Term embryo development
Presence of Splice variants No