LOC_Os06g03860

Expression Profile

RGAP LOCUS ID LOC_Os06g03860
RAP-DB ID Os06g0129400
Function uncharacterized membrane protein, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization plas
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 4.594

3) NUCPRED Prediction
localization Non Nuclear
score 0.16

4) Y-Loc Prediction
localization Cytoplasm
score 83
confidence value 0.28
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSPX-MFS3|OsPSS3
Function assigned as per literature OsSPX-MFS3 is a low-affinity Pi transporter that mediates Pi efflux from the vacuole into cytosol and is coupled to proton movement
Subcellular localization as per literature tonoplast
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NOT NUCLEAR
PMID 26424157
Reference of localization http://www.plantphysiol.org/content/plantphysiol/169/4/2822.full.pdf
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.096
NLS score -0.47
Protein Sequence >LOC_Os06g03860.1 protein
MVNFGKKLMADQIPEWKGYYINYKLMKKKVKQYGQQVQQGEKDRRRVLKDFSKMLDDQIEKIVLFLLEQQGALASRIEKLGKQRAILAEQPDISAIAELR
EAYREVGLDLIKLLKFVDLNATGIRKILKKFDKRFGYRFTDYYVTSRSNHPYSQLQQVFKHVGVGAVVGALSRNLADLQERQGSYLSIYDQPSTALKDPI
IDMINSSVDKLTRSTNFLRFLGQHALIVGEESPSTAEEEEIEDQKYHFMSLMLNLVNTFLYMVNTYIIVPTADDYSVSLGAASTVCGVVIGSMAVAQIFS
SVYFSAWSNKSYFRPLIFSSIVLFLGNVCYAMAYDMKSLTVLIIGRLLCGMGSARAVNRRYISDCVPARIRMQASAGFVSASALGMACGPALAGLLQWKF
KIYMVTFNQSTLPGWVMAVAWLLYLVWLWISFKEPNRATEVNGTQQNPASVQRADIEQLENGLAQPLLRDSSKKDEDDDEEVDDSEEGTHDSRKPATSIG
SAYRLLTPSVKVQLLIYFMLKYAMEILLSESSVITNHYFNWNTSAVAIFLAILGLTVLPVNAVVGTYISNMFEDRQLLMVSQITLLVGIIFSFKITSTYS
VVQYVVSALVTFVSAEVLEGVNLSLLSSVMSSRLSRGTYNGGLLSTEAGTLARVVADCTITAAGYLGIGKLLNVTLLPSLVICAASIASTFLTYNSLF

GO Analysis
1
GO Category Molecular Function
GO Term molecular_function
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Biological Process
GO Term transport
4
GO Category Biological Process
GO Term cellular process
Presence of Splice variants YES