LOC_Os06g03850

Expression Profile

RGAP LOCUS ID LOC_Os06g03850
RAP-DB ID Os06g0129300
Function impaired sucrose induction 1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 2.245

3) NUCPRED Prediction
localization Non Nuclear
score 0.27

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.34
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsISI1
Function assigned as per literature OsISI1 couples the availability of carbohydrates to the control of sugar-responsive gene expression and plant growth
Subcellular localization as per literature Cytoplasm and Nucleus
Cells used for localization experiment Onion epidermal cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 16805736
Reference of localization https://onlinelibrary.wiley.com/doi/pdf/10.1111/j.1365-313X.2006.02765.x
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os06g03850.1 protein
MSRKEVVVAAAGGGAGAESGAEGSSSAGSSGGGGELAEALARRRLYREVTLALRTGLRDAKADFSFLRARGLRSLLGFLRSTASATDDSQLLLFRHSQSI
PDLQVIPVLFQNSLHQPKEDPVVTLDHIFGVEPMKITSPPTDNEIALALRVLEGCCLLYSRCTALAHKYKAVKVILNILANRGPAEQGVCLDALISLMLD
SPPNQMDFEEFSGLEKVAELLKDVQVEEHIRLKCGEFLLLLIGHVYAKENSPIHEQMRILFGEQCASLIWAASRFGSTLDVEQRQMALQIQARRVVESLE
PY

GO Analysis
1
GO Category Biological Process
GO Term signal transduction
2
GO Category Biological Process
GO Term carbohydrate metabolic process
3
GO Category Molecular Function
GO Term binding
Presence of Splice variants No