LOC_Os06g01390

Expression Profile

RGAP LOCUS ID LOC_Os06g01390
RAP-DB ID Os06g0103500
Function acyl-coenzyme A oxidase 1.2, peroxisomal, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 8

2) CELLO Prediction
localization Cytoplasmic
score 1.328

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Cytoplasm
score 89
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsACX1
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.106
NLS score -0.47
Protein Sequence >LOC_Os06g01390.1 protein
MEGGVGGEVDHLAGERATAQFDVEHMKVAWAGSRHAVDVADRMARLVASDPVFRKDNRTMLPRKELFKDTLRKAAHAWKRIVELRLTEEEANLLRLYVDQ
PGYVDLHWGMFVPAIKGQGTEEQQKKWLPLAYRFQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKASTHAVVYARLITE
GKDYGIHGFIVQLRSLEDHSPLPGVTLGDIGGKFGSGAYNSMDNGVLRFDHVRIPRDQMLMRLSQVTKEGKYVHSDVPKQLLYGTMVFVRQTIVADASKA
LSRATCIAVRYSAIRKQFGPQTGGPETQVLNYKTQQSRLFPLLASAYAFRFVGEWLKWLYTDVTHKLEAKDFSTLQEAHACTAGLKAVTTSATADGIEEC
RKLCGGHGYLNSSGLPELFAIYVPACTYEGDNVVLLLQVARFLMKTVSQLASGKQPVGTTAYMGNIQYLMQCKCGVNTAEDWLNPAAIREVFEARALRMA
VNCAQNINKAPSQEEGFYELSPDLLEVAVAHIQLIIVTKFIEKLEQDIPGEGVKEQLCILCNVYALYLVHKHLGDFLSTGSITARQGALANEQLGKLYAQ
VRPNAVALVDAFNYTDHYLGSVLGRYDGNVYPALYEEAWKDPLNDTDVPDGYQEHLRPLLKQQLKLSRL

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term multicellular organismal development
3
GO Category Biological Process
GO Term response to biotic stimulus
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Cellular comBiological Processonent
GO Term peroxisome
6
GO Category Biological Process
GO Term metabolic process
7
GO Category Biological Process
GO Term cellular process
8
GO Category Biological Process
GO Term lipid metabolic process
9
GO Category Biological Process
GO Term biological_process
10
GO Category Biological Process
GO Term catabolic process
11
GO Category Molecular Function
GO Term catalytic activity
12
GO Category Biological Process
GO Term biosynthetic process
Presence of Splice variants No