LOC_Os05g51510

Expression Profile

RGAP LOCUS ID LOC_Os05g51510
RAP-DB ID Os05g0592800
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization E.R.
score 4

2) CELLO Prediction
localization Chloroplast
score 2.528

3) NUCPRED Prediction
localization Non Nuclear
score 0.14

4) Y-Loc Prediction
localization Cytoplasm
score 98
confidence value 0.67
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsABIL2
Function assigned as per literature OsABIL2 in regulating root development
Subcellular localization as per literature Nucleus and the cytosol
Cells used for localization experiment Nicotiana benthamiana pavement cells
NUCLEAR or Not Nuclear NUCLEAR
PMID 26491145
Reference of localization https://academic.oup.com/pcp/article/56/12/2396/2755915
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.094
NLS score -0.47
Protein Sequence >LOC_Os05g51510.1 protein
MEDLALPAAPPAPTLSFTLLAAAAAVAEAMEEALGAALPPLTAPVPAPGDDSACGSPCSVASDCSSVASADFEGFAELGTSLLAGPAVLFDDLTAASVAV
AEAAEPRAVGATARSVFAMDCVPLWGLESICGRRPEMEDDYAVVPRFFDLPLWMVAGDAAVDGLDRASFRLPAHFFAVYDGHGGVQVANYCRKRIHAVLT
EELRRAEDDACGSDLSGLESKKLWEKAFVDCFSRVDAEVGGNAASGAPPVAPDTVGSTAVVAVVCSSHVIVANCGDSRAVLCRGKQPLPLSLDHKPNRED
EYARIEALGGKVIQWNGYRVLGVLAMSRSIGDKYLKPYIIPVPEVTVVARAKDDDCLILASDGLWDVMSNEEVCDAARKRILLWHKKNAATASTSSAQIS
GDSSDPAAQAAADYLSKLALQKGSKDNITVVVIDLKAHRKFKSKA

GO Analysis
1
GO Category Biological Process
GO Term response to stress
2
GO Category Biological Process
GO Term response to abiotic stimulus
3
GO Category Biological Process
GO Term generation of precursor metabolites and energy
4
GO Category Biological Process
GO Term photosynthesis
5
GO Category Molecular Function
GO Term hydrolase activity
6
GO Category Biological Process
GO Term response to endogenous stimulus
7
GO Category Cellular comBiological Processonent
GO Term cell
8
GO Category Molecular Function
GO Term protein binding
9
GO Category Biological Process
GO Term protein modification process
10
GO Category Biological Process
GO Term metabolic process
11
GO Category Biological Process
GO Term cellular process
12
GO Category Biological Process
GO Term signal transduction
Presence of Splice variants YES