LOC_Os05g50610

Expression Profile

RGAP LOCUS ID LOC_Os05g50610
RAP-DB ID Os05g0583000
Function WRKY8, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 4.395

3) NUCPRED Prediction
localization Non Nuclear
score 0.62

4) Y-Loc Prediction
localization Nuclear
score 99.98
confidence value 0.97
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category WRKY

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsWRKY8
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.127
NLS score -0.22
Protein Sequence >LOC_Os05g50610.1 protein
MSGPGGGGHGLYEDHPAAAGFLPFDHDDDVVASFFFGRSAASGGGAGAGAGAGDDDGVGLITPYSSITDYLQGFLQDPVYASSPLGGDAAVKHETVVDHP
SQAGGVAAAPATPNSSVLSSSSEAAGGDDLRRCKKGRRPEDEEEEEIDDEGSAVQSCKTNKMKNKKGAKKEREPRVAFMTKSEVDHLEDGYRWRKYGQKA
VKNSSYPSYYRCTAPRCGVKKRVERSEQDPSMVITTYEGQHTHPSPVSYHMHRQQGLMHVSARGVMPGAAGAYQFGAPPPPLLGFDEALAARSQDTVLVS
QEDRLSQQQRSLYYRVDVQSCWAADRSRAHNCITKGKRKPGLGPNNTGATWELGRNPKTHRSRLAPGRTPHQQDPLRLLQRLGGDYLYRARRGVHFTHTT
LLTRITQPVGISHVGRPPSFHDKAFPKPIQVYHMPTRGVPDQQQESVLKCESGKTVHPAQDVQRWLALLEIWSLILEILALRVFGLRNYTRNGTTQQTAK
MKP

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term nucleobase, nucleoside, nucleotide and nucleic acid metabolic process
3
GO Category Molecular Function
GO Term sequence-specific DNA binding transcription factor activity
Presence of Splice variants YES