LOC_Os05g50380

Expression Profile

RGAP LOCUS ID LOC_Os05g50380
RAP-DB ID Os05g0580000
Function glucose-1-phosphate adenylyltransferase large subunit, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Chloroplast
score 3.801

3) NUCPRED Prediction
localization Non Nuclear
score 0.07

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.7
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsAPL3
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.114
NLS score -0.47
Protein Sequence >LOC_Os05g50380.1 protein
MQFSSVFPLEGKACVSPIRRGGEGSASDRLKIGDSSSIKHDRAVRRMCLGYRGTKNGAQCVLTSDAGPDTLHVRTSFRRNFADPNEVAAVILGGGTGTQL
FPLTSTRATPAVPIGGCYRLIDIPMSNCFNSGINKIFIMTQFNSASLNRHIHRTYLGGGINFTDGSVEVLAATQMPGEAAGWFQGTADAVRKFIWVLEDY
YKHKAIEHILILSGDQLYRMDYMELVQKHVDDNADITLSCAPVGESRASDYGLVKFDSSGRVIQFSEKPKGTDLEAMKVDTSFLNFAIDDPTKFPYIASM
GVYVFKRDVLLNLLKSRYAELHDFGSEILPRALHEHNVQAYVFADYWEDIGTIRSFFDANMALCEQPPKFEFYDPKTPFFTSPRYLPPTKSDKCRIKDAI
ISHGCFLRECTIEHSIVGVRSRLNSACELKNTMMMGADLYETEDEISRLLSEGKVPIGVGENTKINNCIIDMNARVGRNVVITNSEGVQESDRPEEGYYI
RSGIVVILKNATIKDGKVI

GO Analysis
1
GO Category Biological Process
GO Term biosynthetic process
2
GO Category Biological Process
GO Term carbohydrate metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Cellular comBiological Processonent
GO Term cellular_component
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants YES