| RGAP LOCUS ID |
LOC_Os05g49890 |
| RAP-DB ID |
Os05g0574500 |
| Function |
ras-related protein, putative, expressed |
Sub-cellular Localization
Predictions |
1) WoLF-PSORT Prediction |
| localization |
chlo |
| score |
6 |
2) CELLO
Prediction
|
| localization |
Nuclear |
| score |
1.99 |
3) NUCPRED
Prediction
|
| localization |
Non Nuclear |
| score |
0.15 |
4) Y-Loc
Prediction
|
| localization |
Cytoplasm |
| score |
98 |
| confidence value |
0.74 |
| Number Of Software Predicting Nucleus |
1 |
| Seed Specific |
No |
| Transcription factor category |
|
Experimental evidence for
subcellular localization |
| Published gene name (updated 1 January 2020) |
OsRAN2 |
| Function assigned as per literature |
OsRAN2 negatively responds to abiotic stress stimulus |
| Subcellular localization as per literature |
Nucleus and cytoplasm |
| Cells used for localization experiment |
Onion epidermal cells and root cells of transgenic plants (rice and Arabidopsis) |
| NUCLEAR or Not Nuclear |
NUCLEAR |
| PMID |
20018899 |
| Reference of localization |
https://academic.oup.com/jxb/article/61/3/777/475625 |
| Is Subcellular localization evidence by author available ?
|
No |
Sequence Analysis
|
| Number of PAT4 |
1 |
| Number of PAT7 |
0 |
| Number of Bipartite |
0 |
| Basic residues % |
0.122 |
| NLS score |
-0.29 |
| Protein Sequence |
>LOC_Os05g49890.1 protein
MALPNQGTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFTTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTSRLT
YKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFVEAVALKPPEVPIDLAMQQQH
EAELAAAAAQPLPDDDDDLIE |
GO Analysis |
| 1 |
| GO Category |
Molecular Function |
| GO Term |
protein binding |
|
| 2 |
| GO Category |
Cellular comBiological Processonent |
| GO Term |
cellular_component |
|
| 3 |
| GO Category |
Biological Process |
| GO Term |
catabolic process |
|
| 4 |
| GO Category |
Biological Process |
| GO Term |
nucleobase, nucleoside, nucleotide and nucleic acid metabolic process |
|
| 5 |
| GO Category |
Biological Process |
| GO Term |
transport |
|
| 6 |
| GO Category |
Biological Process |
| GO Term |
cellular process |
|
| 7 |
| GO Category |
Molecular Function |
| GO Term |
nucleotide binding |
|
| 8 |
| GO Category |
Molecular Function |
| GO Term |
hydrolase activity |
|
| Presence of Splice variants |
YES |
