LOC_Os05g49730

Expression Profile

RGAP LOCUS ID LOC_Os05g49730
RAP-DB ID Os05g0572700
Function protein phosphatase 2C, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 6

2) CELLO Prediction
localization Chloroplast
score 2.22

3) NUCPRED Prediction
localization Non Nuclear
score 0.36

4) Y-Loc Prediction
localization Cytoplasm
score 70
confidence value 0.41
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsPP2C51
Function assigned as per literature OsPP2C51 is a positive regulator of seed germination by directly suppressing active phosphorylated OsbZIP10
Subcellular localization as per literature Nucleus
Cells used for localization experiment Rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 28000033
Reference of localization https://link.springer.com/article/10.1007%2Fs11103-016-0568-2#Fig6
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 2
Basic residues % 0.144
NLS score 1.14
Protein Sequence >LOC_Os05g49730.1 protein
MRETGATDEGHACEVVVAGGDGKAAAARRRRRLELRRLGLAAEDDAAAKRIRSVKDGSSSDDSSTEVVPRSWPACVSHGSVSVIGRRREMEDAVAIERTF
MASTGDGAGAIRGGGEGEEDFFAVYDGHGGSRVAEACRKRMHVVLAEEVSLRRLRGQSASGGDVRWKEAMLASFARMDGEVVGSVAAAAPRVDGTEPSGF
RTVGSTAVVAVVGRRRIVVANCGDSRAVLSRGGVALPLSTDHKPDRPDELERVEAAGGRVINWNGYRVLGVLATSRSIGDYYLKPFVSAEPEVRVVERTD
KDEFLILASDGLWDVVSNEVACKIARNCLNGRAASMFPESVSGSSAADAAALLAELAVSRGSRDNISVVVVELRRLKSRAA

GO Analysis
1
GO Category Cellular comBiological Processonent
GO Term cell
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term catalytic activity
6
GO Category Molecular Function
GO Term hydrolase activity
Presence of Splice variants No