LOC_Os05g48060

Expression Profile

RGAP LOCUS ID LOC_Os05g48060
RAP-DB ID Os05g0554400
Function phosphatidylserine synthase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 5

2) CELLO Prediction
localization PlasmaMembrane
score 4.874

3) NUCPRED Prediction
localization Non Nuclear
score 0.12

4) Y-Loc Prediction
localization Nuclear
score 36.71
confidence value 0.08
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SUI2
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.1
NLS score -0.47
Protein Sequence >LOC_Os05g48060.1 protein
MEAKQRTRHRDGEERRLVAAADGGAEEYDPWTAWLYKPHTISVLLVGACLLIWASGALDPEGASYHSSATSIKRGVWAMIAVFLAYCTLQAPSTILIRPH
PAVWRLVHGLAVVYLVALAFLLFQNRDDARQFMKHLYPDLGVELPERSYGADCRLYVPENPKNKFINIYTLFDEFVVAHILGWWGKAVMIRNQLLLWVLS
IGFELMELTFRHMLPNFNECWWDSIILDILICNWFGIWAGMHTVRYFDGKTYEWVGLSRQPSIMGKVKRSLSQFTPAQWDKDQWYPFMGPLRFVQVLFLC
VVFMTVELNTFFLKFCLWIPPRNPLVVYRLILWWLIAIPTIREYNSYLQNSKPVKKVGAFCWLSLAICIVELLICMKFGHGLFHDPMPTWLIIFWSSVGV
ALVVFLLAWSWRNHLKYQRKRL

GO Analysis
1
GO Category Molecular Function
GO Term transferase activity
2
GO Category Cellular comBiological Processonent
GO Term nucleus
3
GO Category Biological Process
GO Term biosynthetic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Biological Process
GO Term lipid metabolic process
6
GO Category Cellular comBiological Processonent
GO Term membrane
7
GO Category Cellular comBiological Processonent
GO Term endoplasmic reticulum
Presence of Splice variants No