LOC_Os05g47560

Expression Profile

RGAP LOCUS ID LOC_Os05g47560
RAP-DB ID Os05g0549100
Function serine/threonine-protein kinase SNT7, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 11

2) CELLO Prediction
localization Chloroplast
score 1.408

3) NUCPRED Prediction
localization Non Nuclear
score 0.39

4) Y-Loc Prediction
localization Chloroplast
score 8
confidence value 0.27
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) Stn7
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 5
Number of PAT7 0
Number of Bipartite 1
Basic residues % 0.132
NLS score 1.46
Protein Sequence >LOC_Os05g47560.1 protein
MATGSLGLSTSFLPGHDTLLRRRRRRPPATTAASFRPVTAELGGELGRQLVEAVGVGLPCTVMACGDVIYRSTLPRNDGLTITAPGVALALAAASYLWST
PGVAPGFFDMFVLAFAERVFRPTFRKDEFVLGKKLGEGAFGVVYKASLDDPKAAEKQGAVVVKKATEYGAVEIWMNERVRRACASSCADFIYGFRESKAK
GKGADEYWLIWRYEGEDTLFDLMQSKEFPYNVETKILGDVQDLPKGIARENKIIQTVMRQLLFALDGLHSTGIVHRDVKPQNVIFSEGSRTFKIIDLGAA
ADLRVGINYIPSEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSLGLIFLQMAFPSLRTDSSLIQFNRQLKRCNYDLEAWRNL
VEPRATPELRRGFDILDLDGGIGWELLTSMVRYKARQRTGAKAALAHPYFNREGLLGLSVMQNLRLQLLRATQKDYSEAARWVVGLMARSGTEAEGGFTE
AQLQELREIKPKKGSARRNLLASVLRVQRKVVRTINESMDELSSQSKSIWWSRWIPKEE

GO Analysis
1
GO Category Biological Process
GO Term biological_process
2
GO Category Biological Process
GO Term metabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Molecular Function
GO Term kinase activity
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Biological Process
GO Term generation of precursor metabolites and energy
7
GO Category Biological Process
GO Term photosynthesis
8
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No