LOC_Os05g44310

Expression Profile

RGAP LOCUS ID LOC_Os05g44310
RAP-DB ID Os05g0519400
Function vesicle-fusing ATPase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 9

2) CELLO Prediction
localization Cytoplasmic
score 2.282

3) NUCPRED Prediction
localization Non Nuclear
score 0.18

4) Y-Loc Prediction
localization Cytoplasm
score 75
confidence value 0.25
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSec18
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.04
Protein Sequence >LOC_Os05g44310.1 protein
MAGRNYHGYGGGGGGGMSMVVASTPGQELALTNCAYVSSADIRRFPNALALVGDAFVFTLRAHDAVSAGSIALNAIQRRQTKVSAGDSITVSSFAPPDDF
KLALLTLELEYTKARTNRNEELDAVVLAQQLRRRFLDQVMTSGQRVPFEFCGTNYIFTVNQALLDGQENSTPLDRGFLSSDTYIIFEAAPNSGIKVVNQK
EAASSKLFKHKEFNLEKLGIGGLSAEFTDIFRRAFASRVFPPHVVNKLGIKHVKGILLYGPPGTGKTLMARQIGKLLNGNEPKIVNGPEVLSKFVGETEK
NVRDLFADAENDQKTRGDQSDLHVIIFDEIDAICKSRGSTRDGTGVHDSIVNQLLTKIDGVEALNNVLLIGMTNRKDLLDEALLRPGRLEVHIEINLPDE
NGRLQILQIHTNKMKESSFLSPNVNLQELAARTKNYSGAELEGVVKSAVSYALNRQISMDDLTKPLDEESIKVTMDDFVNALHEITPAFGASTDDLERCR
LRGMVDCGKAHRHLYERGMLLVEQVKVSKGSPLVTCLLEGPAGSGKSALAATVGIDSDFAYVKIISAETMIGFSESSKCAQICKVFEDAYKSQFGIIILD
DIERLLEYVAIGPRFSNIISQTLLVLLKRVPPKGKNLLVIGTTSEVGFLESIGMCDVFSVTYHVPKLKKEDATKVLRHLNVFDEADIDAAAEALDDMPIK
KLYTLVEMAAQGPSGGSAEAVYGGEEKIDINHFFSILSDIIRY

GO Analysis
1
GO Category Molecular Function
GO Term protein binding
2
GO Category Cellular comBiological Processonent
GO Term cellular_component
3
GO Category Cellular comBiological Processonent
GO Term vacuole
Presence of Splice variants No