LOC_Os05g43880

Expression Profile

RGAP LOCUS ID LOC_Os05g43880
RAP-DB ID Os05g0514600
Function gibberellin 2-beta-dioxygenase, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 8

2) CELLO Prediction
localization Chloroplast
score 2.334

3) NUCPRED Prediction
localization Non Nuclear
score 0.01

4) Y-Loc Prediction
localization Nuclear
score 50.87
confidence value 0.11
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) SBI
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.093
NLS score -0.47
Protein Sequence >LOC_Os05g43880.1 protein
MVVLAKPAALEQISLVRSPSVEDNFGAGLPVVDLAADGAAGEVVRACERFGFFKVVSHGVGEGVVGRLEAEAVRFFASPQAAKDAHGPASPFGYGSKRIG
RNGDMGWLEYLLLAIDGASLSRSSPAPSSSLRDAANKYVGAMRGMARTVLEMVAEGLGVAPRGALADMVVGDGAASDQILRLNHYPPCPPLLQNLMPNCS
PTGFGEHTDPQLISILHSNSTSGLQVALHHDADAGDHQWVTVPPDPASFLVIVGDSLQVMTNGRMRSVRHRVVANKLKSRVSMIYFGGPPLEQRIAPLRQ
LLVAGVGNGEEEEQSRYEEFTWGEYKKAAYLSRLSDNRLAPFHRQPPPVANPLA

GO Analysis
1
GO Category Molecular Function
GO Term catalytic activity
2
GO Category Biological Process
GO Term catabolic process
3
GO Category Biological Process
GO Term cellular process
4
GO Category Biological Process
GO Term lipid metabolic process
5
GO Category Biological Process
GO Term metabolic process
6
GO Category Biological Process
GO Term response to abiotic stimulus
Presence of Splice variants No