LOC_Os05g41220

Expression Profile

RGAP LOCUS ID LOC_Os05g41220
RAP-DB ID Os05g0491200
Function SNF1-related protein kinase regulatory subunit beta-1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization cyto
score 10

2) CELLO Prediction
localization Nuclear
score 1.068

3) NUCPRED Prediction
localization Non Nuclear
score 0.06

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.89
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) akin-b|akin-beta
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.076
NLS score -0.47
Protein Sequence >LOC_Os05g41220.1 protein
MGNASGKEGEENGHVAAGAAAGVAGSAGAAARAPPPLMPPDAVMRELPPPVPYVFTPQVPVAPLHIPTEFSPVFNNSWINESDESTNNHPQEKGIPTLIS
WSQGGNEVFVEGSWDNWTSRRVLEKSGKDHTILLVLPSGVYHYRIIVDGEPKYVPELPHVADEGGQVANLLDVHDYIPESLGSVAGFDSPPSPEHSYDLQ
LPGDEEFAKEPPILPPQLVMSVLGDTDNSEEQTLKPKHVVLNHLYIEKGWGSQSLLALGVTHRFQSKYVSFVLYKPLRRSSTAKRTKNGG

GO Analysis
1
GO Category Biological Process
GO Term response to extracellular stimulus
2
GO Category Biological Process
GO Term cell communication
3
GO Category Molecular Function
GO Term protein binding
4
GO Category Biological Process
GO Term biosynthetic process
5
GO Category Biological Process
GO Term protein modification process
6
GO Category Molecular Function
GO Term kinase activity
Presence of Splice variants YES