LOC_Os05g41172

Expression Profile

RGAP LOCUS ID LOC_Os05g41172
RAP-DB ID Os05g0490700
Function histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization Nuclear
score 9

2) CELLO Prediction
localization Nuclear
score 1.462

3) NUCPRED Prediction
localization Non Nuclear
score 0.43

4) Y-Loc Prediction
localization Nuclear
score 99.64
confidence value 0.68
Number Of Software Predicting Nucleus 3
Seed Specific No
Transcription factor category SET

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSET22|SDG728|OsSUVH8
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 2
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.11
NLS score -0.03
Protein Sequence >LOC_Os05g41172.2 protein
MDRASNFIPGPYQELVDAKPIRSLAPMFPAPLGINVNQSSTPPLVCVTPVGQFPVGFGSGILPTFGSTTAFTTTANGVSYTSYTNNGAIDATPISAYKTR
PGIVSLDGDEPYSGSASGRKSKRSSGSAADGSNGVKFKRPKPVYKNFVAGKELAFLPPSSSDPREVVEAVHMTFEALRRRHLQLDEIQETSKRADLKAGA
IMMASNIRANVGKRVGLVPGVEIGDIFYFRMELCIIGLHAPSMGGIDYMSAKFGSDEDSVAICIVAAGGYENVDDDTDTLVYSGSGGNSRNSEERHDQKL
ERGNLALERSLHRKNEIRVVRGFRDPFCLTGKIYIYDGLYKIQESWKERTKSGINCFKYKLLREPGQPDGAALWKMTQGWIDNPASRGRVILPDLSSAAE
ALPVCLVNEVDHEKGPGHFTYASQVKYLRPLSSMKPLQGCGCQSVCLPGDPNCACGQHNGGDLPYSSSGLLACRKPIIYECGDACHCTTNCRNRVTQKGV
RFHFEVFRTANRGWGLRCWDPIRAGAFICEYTGEVIDELKVNLDDSEDDYIFQTVCPGEKTLKFNFGPELIGEESTYVSADEFEPLPIKISAKKMGNVSR
FMNHSCSPNVFWQPVQHDHGDDSHPHIMFFALKHIPPMTELTFDYGVAGSESSGSRRTKNCFCGSSNCRGVF

GO Analysis
1
GO Category Biological Process
GO Term cellular component organization
2
GO Category Biological Process
GO Term protein modification process
3
GO Category Biological Process
GO Term regulation of gene expression, epigenetic
4
GO Category Cellular comBiological Processonent
GO Term nucleus
5
GO Category Molecular Function
GO Term transferase activity
Presence of Splice variants YES