LOC_Os05g41090

Expression Profile

RGAP LOCUS ID LOC_Os05g41090
RAP-DB ID Os05g0489900
Function CAMK_CAMK_like_CG18020d.1 - CAMK includes calcium/calmodulin depedent protein kinases, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 5

2) CELLO Prediction
localization Nuclear
score 1.525

3) NUCPRED Prediction
localization Non Nuclear
score 0.52

4) Y-Loc Prediction
localization Cytoplasm
score 96
confidence value 0.93
Number Of Software Predicting Nucleus 1
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsCCaMK|OsDMI3
Function assigned as per literature
Subcellular localization as per literature Nucleus, the cytoplasm and the plasma membrane
Cells used for localization experiment rice protoplasts
NUCLEAR or Not Nuclear NUCLEAR
PMID 22869603
Reference of localization https://www.cell.com/action/showPdf?pii=S1674-2052%2814%2960158-1
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 0
Number of PAT7 0
Number of Bipartite 0
Basic residues % 0.128
NLS score -0.47
Protein Sequence >LOC_Os05g41090.1 protein
MSKTESRKLSDDYEVVDVLGRGGFSIVRRGVSKSEEKTQVAIKTLRRLGPAMAGMKQGTKPVPGSGLPMWKQVSISDALLTNEILVMRRIVESVAPHPNV
INLHDVYEDVHGVHLVLELCSGGELFDRIVGRDRYSEFDAACVIRQIASGLEALHKASIVHRDLKPENCLFSDKDEKSTLKIMDFGLSSVEDFSDPIVAL
FGSIDYVSPEALSRQEVSAASDMWSVGVILYILLSGCPPFHAATNREKQQRILQGEFSFQDHTWKTISSSAKDLISRLLSVQPYKRPTASDLLRHPWVIG
DCAKQDLMDAEVVSKLQKFNARRKLRAAAIASVLSCKVALRTKRLRNLLGTHDLTSEELDNLRLHFGRICADGENATLSEFEQVLRAMKMDSLIPLAPRV
FDLFDNNRDGTVDMREILCGFSSLRNSRGDDALRLCFQMYDADRSGCISKEELASMLRALPEECLPGDITEPGKLDEVFDQMDADSDGKVTFDEFKAAMN
KDSALQDVLLSSLRPQ

GO Analysis
1
GO Category Molecular Function
GO Term kinase activity
2
GO Category Molecular Function
GO Term protein binding
3
GO Category Molecular Function
GO Term nucleotide binding
4
GO Category Molecular Function
GO Term binding
5
GO Category Biological Process
GO Term protein modification process
Presence of Splice variants No