LOC_Os05g40180

Expression Profile

RGAP LOCUS ID LOC_Os05g40180
RAP-DB ID Os05g0480000
Function serine/threonine-protein kinase stt7, chloroplast precursor, putative, expressed

Sub-cellular Localization Predictions

1) WoLF-PSORT Prediction
localization chlo
score 13

2) CELLO Prediction
localization Chloroplast
score 1.915

3) NUCPRED Prediction
localization Non Nuclear
score 0.15

4) Y-Loc Prediction
localization Chloroplast
score 9
confidence value 0.48
Number Of Software Predicting Nucleus 0
Seed Specific No
Transcription factor category

Experimental evidence for subcellular localization
Published gene name (updated 1 January 2020) OsSTN8
Function assigned as per literature
Subcellular localization as per literature NA
Cells used for localization experiment
NUCLEAR or Not Nuclear
PMID
Reference of localization
Is Subcellular localization evidence by author available ? No

Sequence Analysis
Number of PAT4 1
Number of PAT7 1
Number of Bipartite 0
Basic residues % 0.117
NLS score 0.04
Protein Sequence >LOC_Os05g40180.1 protein
MASSLLLPRATFAATTKHIAVLHPPVASACRPHPPRLIRCGAAAVPDDELLRSLYLVQADAASPVVSADTGNDGWAALLDEIRGSLQAEDSSSSIPAATS
GGVVVPDELLTAPPSVVIPDEILGADPSSTLQAPGPGGGAIPEDLLAALHLDASNPVVRAAWGALSRLDELTSGLSGPQRWAAAAFAAATWAYLTARPGV
LSGAVDAYVLAPLQLAVDSAVGRRSLRMSDFVVGERIGEGSFGVVYSGAVVPRGGAAPAARKGKAKTRLELDERYKEKVILKKIKVGTAGAKECGDYEEW
FNYRVARAAPESCAEFLGSFVADKTKSEFVKGGKWLVWKFEGDRTLGNYMSDRNFPFNLEGLMFGRAVRGLDDGSRAALVVKQVMRQLVTSLKRIHGTGI
VHRDIKPSNLVVTRRGQVKLIDFGAATDLRIGKNYVPDRALLDPDYCPPELYVLPEETPQPPAEPIAAILSPILWQINSPDLFDMYSAGIVLMQMASPML
RSPSGLKNFNAELKAAGYDLNRWRETTRRRPDLQILDLDSGRGWDLATKLISQRGADKRGRLTAAAALRHPYFLLGGDQAAAVLSKLSLSK

GO Analysis
1
GO Category Biological Process
GO Term generation of precursor metabolites and energy
2
GO Category Biological Process
GO Term photosynthesis
3
GO Category Biological Process
GO Term metabolic process
4
GO Category Biological Process
GO Term cellular process
5
GO Category Molecular Function
GO Term kinase activity
6
GO Category Biological Process
GO Term protein modification process
7
GO Category Cellular comBiological Processonent
GO Term thylakoid
8
GO Category Cellular comBiological Processonent
GO Term plastid
Presence of Splice variants No